CDS

Accession Number TCMCG057C60451
gbkey CDS
Protein Id XP_018466914.1
Location join(<293..422,506..987,1055..1273,1356..1670,1761..2066,2144..2212,2285..>2365)
Gene LOC108838481
GeneID 108838481
Organism Raphanus sativus

Protein

Length 849aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018611412.1
Definition PREDICTED: U3 small nucleolar RNA-associated protein 14-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category T
Description BEST Arabidopsis thaliana protein match is U3 ribonucleoprotein (Utp) family protein (TAIR
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14567        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000447        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000472        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0000480        [VIEW IN EMBL-EBI]
GO:0000966        [VIEW IN EMBL-EBI]
GO:0000967        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034471        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
GATGAAAACGTAGAGTCAGAAGATGATGATTTTGATGGTGGTAACAGCGAGAATGATGATGATGATGATGATGATAGACACACACGGATGTTGCAGTCTCTCACTGGAATGCCAAGTGCAGCCTTTCAAGGTGAGAGTAAGAGCAAACCTGTGCTCTTTACTGAAGCATACCCAGAGGGAGAATTCAACCCCACCCGAGATGTTCTGGAGGGTAAGAACGTCCTCACCGAGGAAGACTTTCTGGCGCCTCTTGAAGGAAAACCTGGATATCACAAAACAAGCAAGCAGATTGCTCGTATGCGCAAGGATACTAAGCATGTCGTTCATGCTCCTCTGCCTAAGCCTCAGCGAGAGAGACTGGAGCGTAAAGCTGTGATTGGATTAGTTGATGGGGAGTTTAGCAAGTGGGTGCATCTCGTCAAGAAGAACAGGGAGGCACCAACTGTTTACTTTAACCAAGAAGTCGATCTTGGTTACTCTACTGTTGGCGCAATTGCATCGGAGTTTCAACCCAGGACTGAGTTTGAGAAGAAGATGGCTTCTGTTCTCAATGATAGTGAGGTTTCTGAGGCTCACAGAGACGATGGCGCTCGTCTGCTTGAATTGAACGAGGTTTCTATGGAAGACCACATAAAGACCCGCGACCACATTGCCAAGATTCGGAACCTGCTCTTCCGTCATGAGGTAAAAAGCAAACGAATCAAGAGGATTAAGTCTAAGACTTATCATCGCCTCAAAAACAAAGACCTGAAGAAGTCGTCGCTGGGAGCATTAATGGACCCAGAAATGGCTAAAGAAGAGGCTATGAGGCAAGAGGCTAAACGAGTAGAGGAACGTCTGACGTTAAAGCACAGAAACACAGGGAAGTGGGCGAAGCGCATGGTTCGCCTTGGACTGAATGCGAAATATGATGCAACTCGGGCAGCTATAGCTGAACAACTTCAAATGAATGCTAATTTGTCAAGAAAGATGCACTCCATGGGAGATGGAAGTAGCAGTGATGAGAGCGACGATGAGGAAGGTTTGAATGATGGTTCAGATGAGGACACTCCTTCCAGATTGATAGCAAAAGCAAAGGAGAAGACATTGAAAGCTCTGGAAGATGATGAAGTGCCCAATGCTGGTCTTATGTCATTACCTTTCATGGCCCGTGCTATGAAAAAGAAAAACGAGGAAGCTAATGAAGAAGCAAAACGTGCTCTGGAGGAGTATGAAGAGTGGGAAAATTCTGGTGGAGAAAACTCTAAAAAACCCGTTAGTGTTAGTGGTAGAAGAGTGTTTGGTGCAACCGCTAAAGTGGAAGCTCCAAAAGAGTCTAAAAAGGATTCAGATAACTTTTACGACAACAGTGATAGTGACAATGATATGGCTGGCGTAGAAGATAACGACATGCAGGATGTAAGAGATAATGCCTCACCTGCTAGAAACACTGGAACCATTACAGAAACTGAGAAGTTTGATGATGTTGCATCTAAGACAACATTCGATGTTGCCATGTTTGCATCAGGCTCCTGGAAGAAGATGGCAAGCTGCAAAAACACAGAATCCAAAAATGAGTCAAAGAAGACACGTGCACCCATCTCACAGTCTCAAGATAAAAAG
Protein:  
MGGLKRKSSSSAKSVAKSKKKKKGPHLPNSILKVIADQKRPLNSDEEEDEIDSDDEHGGDLYEYEEGVPEEESRKNNRYDRHDNYDYELPDDFEDENVESEDDDFDGGNSENDDDDDDDRHTRMLQSLTGMPSAAFQGESKSKPVLFTEAYPEGEFNPTRDVLEGKNVLTEEDFLAPLEGKPGYHKTSKQIARMRKDTKHVVHAPLPKPQRERLERKAVIGLVDGEFSKWVHLVKKNREAPTVYFNQEVDLGYSTVGAIASEFQPRTEFEKKMASVLNDSEVSEAHRDDGARLLELNEVSMEDHIKTRDHIAKIRNLLFRHEVKSKRIKRIKSKTYHRLKNKDLKKSSLGALMDPEMAKEEAMRQEAKRVEERLTLKHRNTGKWAKRMVRLGLNAKYDATRAAIAEQLQMNANLSRKMHSMGDGSSSDESDDEEGLNDGSDEDTPSRLIAKAKEKTLKALEDDEVPNAGLMSLPFMARAMKKKNEEANEEAKRALEEYEEWENSGGENSKKPVSVSGRRVFGATAKVEAPKESKKDSDNFYDNSDSDNDMAGVEDNDMQDVRDNASPARNTGTITETEKFDDVASKTTFDVAMFASGSWKKMASCKNTESKNESKKTRAPISQSQDKKGSRDEESEDSESEAEEMVDGVLASASKETFEIPSQAELINRAFAGDDVLDEFEKDKEEVLNQEVPKPEKPVLLPGWGDWCNVQRKRGISKRMVMEHEAEEREREQKLKTRKDARLKHVIISEKVDKRAEKLHTTTLPFPHTSKEAFEHSMRMPIGPEFNPSTVVSELNRPEVVKKTGVIIKPVKFEEVNPNDEVDDEHPRNHQKQRPKKNTGKRQGKVKSK